species:   Venon
pid:       PID2106
parent:    vna-miR-6-5p
paralog:   
locus:     PDEZ01000042.1:130388-130457
matures:   ['GGUCGACCUCUGGGCGCU', 'CUGCACUUGGGUGGACUGG']
srr:       SRR11514759
genome:    /Users/jax/+Genomes/Fungal_genomes/Venon.GCA_002776445.1_ASM277644v1_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514759.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Jesenicnik2022-cp.SRR11514759.cram PDEZ01000042.1:130388-130457

4 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

       ************                         **************            
UGGGUCGACCUCUGGGCGCUGAAUACGCGGUCAGCUGCACUUGGGUGGACUGGGAGGGGGGGCCGACGGG
(((.((..(((((.((((((.((...((((....))))..)).))))..)).)))))..)).))).....
--GGUCGACCUCUGGGCGCU-------------------------------------------------- l=18 a=0 c
----------------------------------CUGCACUUGGGUGGACUGG----------------- l=19 a=0 c*
----------------------------------------------GGACUGGGAGGG------------ l=12 a=1 ma
---------CUCUGGGCGC--------------------------------------------------- l=10 a=0 ma*

----------------------------------------------GGACUGGGAGGG------------ l=12 a=1 (ma)

mb-01011
ax-1011101
ku-01
ss-100011111110
fn-011
